claude-code rejects --dangerously-skip-permissions / defaultMode=
bypassPermissions when running as root, which all hyperhive
containers do. revert to the previous explicit allow-list plumbing
(per-flavor list spliced into permissions.allow + --tools enable
list), keep TodoWrite out of the built-in allow set, and keep the
deny list (TodoWrite, WebFetch, WebSearch, Task) as belt-and-braces
in case anything sneaks past the allow gate.