nginx already carried TLS per vhost, so this is a cert choice rather
than a restructure: a vhost whose name this hive's CA cannot sign
gets the swarm-services pair, and every other vhost keeps the hive
pair.
Which vhosts those are is not decided here. Both the sub-CA's name
constraints and this choice read swarm.serviceDomains, so "a swarm
service" means one thing in one place -- a vhost served a cert its
issuer is constrained out of would fail at TLS, and the two lists
drifting is the only way to get there.
Only in self-signed mode. With ACME or an operator cert there is a
single issuer that already covers every name, and a second pair would
be a cert nobody asked for.
The container import copies the pair only when the host issued one,
and removes a stale copy otherwise: the leaf exists only where the
swarm CA is autoconfigured, so absent is a normal state and a
leftover from a host that stopped issuing it is not.