claude-code rejects --dangerously-skip-permissions / defaultMode=
bypassPermissions when running as root, which all hyperhive
containers do. revert to the previous explicit allow-list plumbing
(per-flavor list spliced into permissions.allow + --tools enable
list), keep TodoWrite out of the built-in allow set, and keep the
deny list (TodoWrite, WebFetch, WebSearch, Task) as belt-and-braces
in case anything sneaks past the allow gate.
claude-settings.json now sets permissions.defaultMode=bypassPermissions
with a small deny list (WebFetch, WebSearch, Task, TodoWrite). The
per-flavor allow list and --tools / --allowedTools CLI flags are gone
— anything not denied auto-approves. mcp.rs loses ALLOWED_BUILTIN_TOOLS,
builtin_tools_arg, allow_list, allowed_mcp_tools. The extraMcpServers
allowedTools field is parsed for back-compat but no longer wired
anywhere; restrict via permissions.deny instead.
