docs: fold swarm/secrets.md into the credentials reference
secrets.md and credentials-reference.md answered the same question from two pages. secrets.md's text now follows the reference's table and operating notes as a 'Where each secret lives' section, unchanged apart from where it sits. Every link and doc path that named secrets.md (docs, nix comments, crate READMEs) points at credentials-reference.md; anchors are unchanged.
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@ -48,7 +48,7 @@ start. The `ensure-callout-keys` verb creates each pair when the store holds
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none, taking an issuer or user seed from the import file it is given when that
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file exists, and removes the file once the store holds a seed. It runs from
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its own unit before the server, because the server needs the public halves to
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start and the responder needs the server. `docs/swarm/secrets.md` has the
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start and the responder needs the server. `docs/swarm/credentials-reference.md` has the
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paths and the boot order.
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## Rules the code follows
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