docs: sort the top-level directories into five sections by what the reader wants
Every docs directory moves under 1-getting-started, 2-handbook, 4-implementation or 5-project; the options reference (section 3) comes from the website and has no directory here. trust-boundary stays whole under the handbook for now. web-ui, swarm and tools split between handbook and implementation, and the command-line references move to 2-handbook/reference. Links, path references in code and nix, and the docs index follow the moves; no page content changes.
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@ -62,7 +62,7 @@ enum Verb {
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format: query::Format,
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},
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/// Print this CLI's reference as markdown (source of `docs/tools/swarm-logs-cli.md`).
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/// Print this CLI's reference as markdown (source of `docs/2-handbook/reference/swarm-logs-cli.md`).
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///
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/// No `completions` sibling, unlike `hivectl` and `swarmctl`: those are
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/// installed on an operator's interactive host, where a completion script
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