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docs: the handbook follows the three layers: swarm, hives, agents

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The handbook's sections were agent-lifecycle, integrations, swarm, tools,
trust-boundary and web-ui, which do not follow how the system is built, so a
reader could not tell which layer a page is about. Its pages now sit in
swarm/, hives/ and agents/, with the accounts an agent can hold outside the
system in external-accounts/.

- swarm/: forge, matrix and the knowledge repo join the swarm pages, and so
  does the swarmctl reference.
- hives/: the dashboard, hivectl and its reference, and the operator/agent
  boundary, with a README that takes over the old web-ui and tools pages.
- agents/: the roster, persistence, config changes, the agent's own web page
  (was web-ui/agent) and the security model, with a README.
- external-accounts/: GitHub and GitLab.

Pages are moved whole; none is split yet. Every reference follows: relative
links in the docs, `docs/2-handbook/...` paths in code comments, the nix
checks that regenerate the CLI references and the ignore list, and docs/README.md,
whose handbook section is now by layer.
This commit is contained in:
iris 2026-11-07 11:20:48 +01:00 • committed by mara
commit 0e84fe8bc4
1 changed files with 393 additions and 363 deletions
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10
docs/4-implementation/scheduler/coordinator.md
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@ -2,7 +2,7 @@
Architecture notes for the `hive-c0re` coordinator daemon's internal subsystems.
For the public API surface (dashboard, socket protocol) see `docs/5-project/process/conventions.md`
and `docs/2-handbook/agent-lifecycle/persistence.md`.
and `docs/2-handbook/agents/persistence.md`.
---
@ -328,7 +328,7 @@ boot with no operator action in this process never finds drift of its own.
Agents build from the swarm's `internal/meta` flake, which swarm-controller
commits and the swarm builder builds from (see
[Config changes](../../2-handbook/agent-lifecycle/config-changes.md#the-swarms-meta-flake)).
[Config changes](../../2-handbook/agents/config-changes.md#the-swarms-meta-flake)).
The hive keeps no flake of its own and deploys the closure the swarm builds
from it, as the agent's `agent-closures` record declares (`attic/closure.rs`).
`agent_set.rs` keeps the
@ -536,7 +536,7 @@ config — all nspawn containers live in `machine.slice`.
## See also
- `docs/2-handbook/agent-lifecycle/config-changes.md` — config PRs, meta flake, system messages
- `docs/2-handbook/agent-lifecycle/persistence.md` — SQLite schema, state-dir layout
- `docs/2-handbook/agents/config-changes.md` — config PRs, meta flake, system messages
- `docs/2-handbook/agents/persistence.md` — SQLite schema, state-dir layout
- `docs/5-project/process/conventions.md` — wire protocol, recipient sentinels
- `docs/2-handbook/agent-lifecycle/agent-roster.md` — the agent roster and privilege
- `docs/2-handbook/agents/agent-roster.md` — the agent roster and privilege