docs: persistence and config changes become one operator page
The operator parts of the persistence and config-changes pages merge into agents/persistence.md. The sqlite tables, state dirs, mounts and migrations move to 4-implementation/agent-state/persistence.md, and the deploy path, meta flake, deploy markers, startup migrations, root container, system messages and autoupdate move to 4-implementation/agent-state/config-changes.md. Links, code comments and nix comments that named the old sections point at the new pages.
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@ -90,7 +90,7 @@ pub enum HostRequest {
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/// `Kill`.
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Kill { name: Ident },
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/// Tear down a sub-agent container, optionally purging state.
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/// See `docs/2-handbook/agents/config-changes.md::Destroy semantics`.
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/// See `docs/4-implementation/agent-state/config-changes.md::Destroy semantics`.
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Destroy {
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name: Ident,
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#[serde(default)]
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