docs: persistence and config changes become one operator page
The operator parts of the persistence and config-changes pages merge into agents/persistence.md. The sqlite tables, state dirs, mounts and migrations move to 4-implementation/agent-state/persistence.md, and the deploy path, meta flake, deploy markers, startup migrations, root container, system messages and autoupdate move to 4-implementation/agent-state/config-changes.md. Links, code comments and nix comments that named the old sections point at the new pages.
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@ -289,7 +289,7 @@ async fn systemd_daemon_reload() -> Result<()> {
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}
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/// Append the bind flag for `child`'s `state` dir into `binds`. See
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/// docs/2-handbook/agents/persistence.md ("Cross-agent access to state") for what
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/// docs/4-implementation/agent-state/persistence.md ("Cross-agent access to state") for what
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/// the holder may touch and why. Creates the missing host-side directory so
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/// nspawn doesn't refuse to start; a missing dir is non-fatal.
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///
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