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docs: persistence and config changes become one operator page

The operator parts of the persistence and config-changes pages merge into
agents/persistence.md. The sqlite tables, state dirs, mounts and migrations move
to 4-implementation/agent-state/persistence.md, and the deploy path, meta flake,
deploy markers, startup migrations, root container, system messages and
autoupdate move to 4-implementation/agent-state/config-changes.md. Links, code
comments and nix comments that named the old sections point at the new pages.
This commit is contained in:
iris 2026-11-10 22:22:06 +01:00 • committed by mara
commit 0ae34b1cd0

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@ -179,7 +179,7 @@ the deploy node, and the graph shows the update as failed and the deploy as
skipped. Each ten-minute retry of a failed update declares a fresh build and
deploy behind it for every agent whose latest deploy the failed update skipped,
so the run that succeeds sends them (see
[Config changes](../../2-handbook/agents/config-changes.md#the-swarms-meta-flake)). A render
[Config changes](../../4-implementation/agent-state/config-changes.md#the-swarms-meta-flake)). A render
equal to the committed `flake.nix` sends no lock.
The controller sends a deploy to every agent a hive places whenever the pin in