docs: persistence and config changes become one operator page
The operator parts of the persistence and config-changes pages merge into agents/persistence.md. The sqlite tables, state dirs, mounts and migrations move to 4-implementation/agent-state/persistence.md, and the deploy path, meta flake, deploy markers, startup migrations, root container, system messages and autoupdate move to 4-implementation/agent-state/config-changes.md. Links, code comments and nix comments that named the old sections point at the new pages.
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@ -131,7 +131,7 @@ checkpoints**, not about sandboxing the agent from its own tools:
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technical control.
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- **Operator sign-off** — config changes are config PRs an operator merges
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on the forge (see
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[`config-changes.md`](config-changes.md)), and
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[`persistence.md`](persistence.md#config-changes)), and
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scheduled prompts are operator-only, set at swarm level
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(see [`schedules.md`](../swarm/schedules.md)).
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Before that merge, the swarm builder evaluates an unmerged config PR
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