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docs: persistence and config changes become one operator page

The operator parts of the persistence and config-changes pages merge into
agents/persistence.md. The sqlite tables, state dirs, mounts and migrations move
to 4-implementation/agent-state/persistence.md, and the deploy path, meta flake,
deploy markers, startup migrations, root container, system messages and
autoupdate move to 4-implementation/agent-state/config-changes.md. Links, code
comments and nix comments that named the old sections point at the new pages.
This commit is contained in:
iris 2026-11-10 22:22:06 +01:00 • committed by mara
commit 0ae34b1cd0

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@ -45,7 +45,7 @@ agent's `state` dir, read-write, at `/agents/<name>/state`; never `config` or
`harness`). An agent holding no permission sees its own dirs and nothing else:
`ManageRootAgent` is the only grant that reaches another agent's state
dir. See
[`persistence.md`](persistence.md)'s _Cross-agent access to state._
[`persistence.md`](../../4-implementation/agent-state/persistence.md)'s _Cross-agent access to state._
### Reading the map-shaped format